Software / Tools


RNAi Library Plate Browser

RNAi Library Screenshot

Javascript Flatfile-Database Browser

 

  • First Version July 2004
  • Last Revision March 2005
  • HTML, Javascript, and several bash Shell scripts.

This is a tool I wrote for the Kemphues lab to show some relevant information about each of the clones in a genomic RNAi library. The main tool is a plate browser which allows one to view or print sheets of information regarding the 96 clones on any plate in a library. A rudimentary search function is also included. The package also includes a set of scripts for Unix shells, used to recompile the database flatfile from text files downloaded from Wormbase.

The program consists of a single monolithic html file and javascript flatfile database. Since this tool falls into the "just barely works at all" category and has no documentation, I am hesistant to release it as-is. If you think it might be useful to you for your lab, or just as an example of bizzare coding practices, send me an email.

DivFix for Mac OS X

Platypus Wrapper for DivFix

  • First Version Sep 2005
A nice OS X wrapper for the perl version of DivFix.
GPL, of course. Some trivial modifications to the actual DivFix script have been made.

>>Download DivFix for Mac OS X<<

Note: Don't run from the mounted image, copy to a "simpler" path first. Read the readme before using.

Simple 7zip Unarchiver for OS X

Discontinued! Try "The Unarchiver" instead!

Platypus Wrapper for 7za (7-zip all platforms)

  • First Version Apr 2006
An OS X wrapper for the command line 7-zip unarchiver.
rather trivial code, for decompression only; compiled with platypus. It works just like OS X 10.3+'s built in unzipping support.

>>Download 7zip Unarchiver for Mac OS X<< (Removed, see notice above)

Installation: Copy to your Applications directory, and double click once. Also gives 7-zip files a swanky icon.
W3C XHTML 1.0
W3C CSS